Browse of TCMCG075C04190 protein

CDS

Accession Number	TCMCG075C04190
gbkey	CDS
Protein Id	XP_017985244.1
Location	complement(join(35842110..35842487,35842916..35843221,35843447..35843751,35843858..35843960,35844080..35844183,35844780..35844969,35845080..35846705))
Gene	LOC18614389
GeneID	18614389
Organism	Theobroma cacao

Protein

Length	1003aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA341501
db_source	XM_018129755.1
Definition	PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Theobroma cacao]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Pre-mRNA-splicing factor CWC22 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03041        [VIEW IN KEGG]
KEGG_ko	ko:K13100        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000375        [VIEW IN EMBL-EBI] GO:0000377        [VIEW IN EMBL-EBI] GO:0000398        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005681        [VIEW IN EMBL-EBI] GO:0005684        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008380        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071006        [VIEW IN EMBL-EBI] GO:0071012        [VIEW IN EMBL-EBI] GO:0071013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1902494        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGATGATTCGAGAGATGAGAGTGGTGGGCGTCGTAATCGTGATAGCAGGCATTCTAGGTCAGATAGAGATAGGGGAAGGCGTGGAAGAGAAAGAGAAAGGAATCATGATGAGAAGGAGGAGAATAGGCGGAGAGAGCATTCTGGATCTTCTGATGAGGAAGAAGGCAAAGCGTGGTAATAGAGGTGGAAGAAGCGGAAGCGTAAGGGAAGGAGGACAAGAGAGGAATCAAGATGGTGATGGTGATGAGAATAGGTGGAGAGAACGCTCTGGAGCTTTTGATGAAGAAGACAAGCGTGCCAATAGAGATAGGAAGCGAGAAAGAGAAAGAATTCGTGATGATGATGTTAAGGATAGGCGGAGAGAACATTCAGGATCTTCTGATGAAGAAGACAAGCTTGGCAATAGAGATGGAAGGCGAGAAAGAGAAAAAATCCATGACGAGGAGGAGGAAAATAGGCGGAGAGAGCATTCTGGATCTTCTGATGAGGAAGAAGGCAAACGTGCTAATAGAGATAGGAGGCGTGAAAGCAAAAGAGGAGGAGGAAAAGAAAGAAATCAAGATGGTGATGTTGGTGAGAATAGGCAGAGAGAACGTCCTGGATCTTTTGATGAAGAAGACAACCGTGCCAATAGAGATAGGAAACGAGAAAGACAAAGAATTCATGATGGTGATGATGAAGAAGGAGATAAGCTTGACAATAGAGATAGAAGGAGAGAAAGAGAAGGAATTCGTGATGATGATGGTAAGAGCAAGCGGAGAGAACATTCTAGATCTTCTGATGAAGAAGAAGACAAGCATGCCGCTAGAGATAGAAAGCGAGAAAGAGAGAGACTTCGTGATGATGATAGGAATAGGCGGAGAGATGCAGTGGAGGAAAATTCTGAATCCTCTGATGAGGAAGAGAAGAGAGGCAAGAGAGATAGGAGGGGAGAAAGGGATAGAAGGAATAGGCATGACAATGGACATAGGGATAGGCATAACCATAGACAGCGGGAATCTGAAGAAGATAGGTACAGACATAGGGACCGACACCGTCATTCACGGCATGATTCAGATGATGATGAGGATTACAGAAGAAGGTCCCAAAGAAATAAAGAACGCGAGAATAAAAGTGATAGGAGAGACAATGATAATCAGCCCAGCCGTAGAAGCAGAGATGATAACAGTTTTAAGGAGAAAGAAGAAGGAGAAATCAAGCAGAAACAACCAGCTTTGCAACAAAACAACTTGAATGGTGATACGGCGAATTTAGGTAGGAGTGGAGGAGTTTATATTCCTCCATTTAAACTAGCAAGAATGATGAAGGAGACAGAAGATAAGAGCAGTGTTGAATATCAGCGATTAACATGGGATGCGCTTAGAAAAAGTATCAATGGACTAGTTAACAAAGTCAATGCTACTAATATAAAGAATATTATTCCAGAACTCTTTGCTGAGAATCTTATTCGAGGAAGGGGTCTCTTTTGTCGTTCATGTATGAAATCTCAGATGGCATCTCCAGGGTTCACAGATGTTTTTGCTGCATTTGTGGCCGTTGTTAACACCAAGTTTCCTGAGGTGGGGGATTTGTTGTTGAGAAGGATTGTTTTGCAGCTTAAGAGAGCATATAAGCGGAATGACAAGCCTCAATTATTAGCTGCCGTTAAATTTATAGCACATCTTGTGAACCAGCAAGTGGCTCATGAGATTATTGCTTTGGAACTGCTCACTGTTTTGCTGGAGAACCCTACTGATGACAGTGTTGAGGTGGCCGTTGGTTTTGTTACCGAGTGTGGATCATTACTTCAGGATCTCTCACCAAAAGGCCTCCATGGTATTTTTGAGCGTTTTCGGGGCATTCTTCATGAAGGGGAGATAGATAAACGTGTTCAATTTCTGATAGAGGGCTTATTTGCTATAAGGAAAGCCAAGTTTCAGGGGTACCCTGCTGTTCGTTCAGAACTAGACCTTGTTGAGCACGAGGACCAATTAACTCACGAAATATCTCTCCAAGATGAGATAGATCCAGAGATCACCCTTGACATTTTCAAACCAGATCCTCAGTTCTTGGAGAATGAAAAGCGTTATGAAGAGTTGAAGAAAACCATTCTTGGTGAGGAATCCGATGATGAAGAGGGGTCTGATGTGGCTTCAGGTGATGAGGAGGATGACGATGATGATGACGAAACTGATGAAGAAGATGAGCAGCAGATGAAAATAAGAGATGAGACAGAGACAAATCTTATAAATCTTCGGAGGACAATCTACCTGACAATCATGTCCAGTGTAGATTTTGAAGAGGCTGGACACAAGCTGCTGAAAATTAAGCTTGAGCCAGGTCAAGAGATGGAGTTATGCGTTATGCTGTTGGAGTGCTGCAGTCAAGAGAGAACTTACCTTCGATATTATGGTCTTCTGGGGCAGCGTTTTTGCATGATCAACAAAGTCTATCAGGAAAATTTTGATCAATGCTTCGTTCAGCAGTATTCTATGATTCATCGTCTTGAAACAAACAAGTTACGTAATGTGGCGAAGTTTTTTGCACATTTACTTGGCACAGATGCTCTGCCTTGGCATGTGCTAGCCTATATACGATTAACTGAGGAGGACACAACTTCTTCTTCCCGAATTTTCATCAAGATTCTCTTCCAGGAATTATCAGAGCATCTTGGAATTCGCAGACTGAATGAGCGGCTTTCAGATCCCACGATGCTGGATTCATTTGAATCTATTTTCCCAAGAGATAATCCCAAGAACACACGATTTTCCATCAACTTTTTCACTTCCATTGGGCTTGGTGGTATCACTGAGAATTTGCGTGAGTATTTGAAGAACATGCCACGGCTTATCATGCAACAACAGAAAACAGCATCTGATTCAGAAGCAGAACCTGAATCTGGGAGCTCGAGCTCGTCTGAATCTGGGGGCTCGAGTTCATCTGATTCAGAAACTGCTAGTTCTGACTCAGAGTCAAATTCGTCAGGTTCTGATGAAAGTGAAAGGCGCAGAAAGAGGAGGAGGAGGAGATGA

Protein:   MMIREMRVVGVVIVIAGILGQIEIGEGVEEKEKGIMMRRRRIGGESILDLLMRKKAKRGNRGGRSGSVREGGQERNQDGDGDENRWRERSGAFDEEDKRANRDRKRERERIRDDDVKDRRREHSGSSDEEDKLGNRDGRREREKIHDEEEENRRREHSGSSDEEEGKRANRDRRRESKRGGGKERNQDGDVGENRQRERPGSFDEEDNRANRDRKRERQRIHDGDDEEGDKLDNRDRRREREGIRDDDGKSKRREHSRSSDEEEDKHAARDRKRERERLRDDDRNRRRDAVEENSESSDEEEKRGKRDRRGERDRRNRHDNGHRDRHNHRQRESEEDRYRHRDRHRHSRHDSDDDEDYRRRSQRNKERENKSDRRDNDNQPSRRSRDDNSFKEKEEGEIKQKQPALQQNNLNGDTANLGRSGGVYIPPFKLARMMKETEDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAAFVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTECGSLLQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRSELDLVEHEDQLTHEISLQDEIDPEITLDIFKPDPQFLENEKRYEELKKTILGEESDDEEGSDVASGDEEDDDDDDETDEEDEQQMKIRDETETNLINLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCVMLLECCSQERTYLRYYGLLGQRFCMINKVYQENFDQCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRRLNERLSDPTMLDSFESIFPRDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQQKTASDSEAEPESGSSSSSESGGSSSSDSETASSDSESNSSGSDESERRRKRRRRR